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Home NEWS Science News Cancer

DNA Origami Unfolds New Strategies in the Battle Against Pancreatic Cancer

Bioengineer by Bioengineer
April 22, 2025
in Cancer
Reading Time: 5 mins read
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Bumsoo Han and Sae Rome Choi

In the ever-challenging landscape of pancreatic cancer diagnosis and treatment, a groundbreaking study from the University of Illinois Urbana-Champaign and Purdue University introduces a promising approach to enhance imaging precision and therapeutic delivery. Pancreatic cancer notoriously evades effective detection due to the dense extracellular matrix enveloping tumor cells, obscuring tumor margins and complicating surgical interventions. Addressing this, researchers have engineered nanoscale DNA origami structures capable of selectively targeting cancerous cells harboring KRAS mutations, which are present in an overwhelming majority of pancreatic cancer cases.

The innovative concept hinges on the versatility of DNA as a structural molecule. By strategically folding double-stranded DNA into predetermined nanostructures — a technique known as DNA origami — scientists created molecular scaffolds that can carry fluorescent dyes or even anticancer drugs. This molecular origami confers precision at an unprecedented scale, enabling the delivery of imaging agents directly to malignant tissues with minimal interference to surrounding healthy cells. Doing so not only promises to refine tumor visualization during surgery but also opens avenues for targeted chemotherapy with reduced systemic toxicity.

To simulate the complex microenvironment of pancreatic tumors, the research team employed advanced 3D-printed tumoroids coupled with microfluidic tumor-stroma models. These systems replicate the dense stromal architecture intrinsic to pancreatic cancer, providing a refined in vitro platform that diminishes dependence on animal models and accelerates therapeutic validation. The DNA origami structures, infused with imaging dyes, demonstrated remarkable selectivity when introduced to these tumoroids, manifesting robust uptake by KRAS-mutant cancer cells while sparing normal pancreatic tissue.

Beyond the synthetic tumor models, the researchers extended their investigation to in vivo murine models embedded with human pancreatic tumor grafts. Here, fluorescence imaging tracked the biodistribution of the DNA origami nanostructures, affirming their preferential accumulation within malignant tissue. This dual-model approach substantiates the biological relevance and translational potential of DNA origami in clinical oncology, moving one step closer to real-world applications in cancer diagnostics and treatment.

A critical discovery within the study was the influence of the physical parameters of the DNA nanostructures on cellular uptake. The team compared tube-shaped and tile-shaped DNA origami configurations at varying sizes, noting that tube-shaped structures approximately 70 nanometers in length and 30 nanometers in diameter exhibited optimal uptake by pancreatic cancer cells. Smaller tubes around 6 nanometers long and the same diameter also showed significant accumulation. Conversely, larger tubes and all tested tile-shaped molecules failed to replicate this efficient targeting. This observation underscores the intricate interplay between nanostructure morphology and cellular internalization mechanisms.

Professor Bumsoo Han, leading the research, expressed surprise at these findings, emphasizing that uptake is governed by an optimal “sweet spot” in both size and shape that facilitates selective penetration into cancerous cells without affecting normal tissue. This revelation challenges previous assumptions that smaller size uniformly enhances uptake and spotlights the need for precision engineering in the development of nanomedicines.

Looking forward, the research sets the stage for the next generation of therapeutics employing DNA origami as delivery vehicles. By loading these nanoscale frameworks with chemotherapy agents, it is conceivable to administer treatments that concentrate drug effects solely on cancer cells, thereby sparing healthy tissue and reducing adverse side effects. The integration of sophisticated tumor models aims to expedite drug discovery cycles while minimizing reliance on animal testing, aligning with ethical advancements in biomedical research.

The implications of this breakthrough extend beyond pancreatic cancer, heralding a paradigm shift in how molecular imaging and targeted therapy might be approached in various malignancies characterized by dense tumor microenvironments. The precision and programmability of DNA origami nanostructures render them ideally suited for bespoke applications tailored to diverse genetic and anatomical tumor profiles.

This research also highlights the collaborative synergy between engineering and biomedical sciences. By merging mechanical engineering expertise with oncology-focused bioengineering, the team crafted a multidisciplinary strategy that leverages nanoscale manipulation, advanced modeling, and molecular biology to tackle one of medicine’s most intractable diseases. The involvement of prominent facilities like the Carl R. Woese Institute for Genomic Biology and the Beckman Institute underscores the confluence of cutting-edge technology driving this innovation.

Published in the journal Advanced Science, these findings mark a significant stride forward in the molecular imaging field. The study provides robust preclinical evidence that DNA origami can revolutionize how imaging agents and drugs are delivered with cellular and tissue specificity. If translated successfully into clinical practice, such technology could enhance surgeons’ ability to delineate tumor boundaries with exquisite clarity and administer localized chemotherapy with enhanced efficacy.

Moreover, the deployment of 3D printing and microfluidics to engineer tumoroids sets a new standard for modeling human cancers ex vivo. These techniques allow researchers to deconstruct and replicate intricate tumor-stroma interactions in a controlled environment, fostering rapid hypothesis testing and therapeutic optimization. This is particularly valuable in diseases like pancreatic cancer, where traditional models have fallen short in mimicking the fibrotic milieu that impairs drug penetration.

Funding from the National Institutes of Health and the National Science Foundation has been instrumental in supporting this endeavor. Such backing also emphasizes the prioritization of interdisciplinary research initiatives that merge nanotechnology, oncology, and engineering to confront complex health challenges. Professor Han, alongside collaborators at Purdue and affiliated research institutes, continues to pioneer advancements aimed at refining diagnostic precision and therapeutic targeting through nanoscale design.

The clinical translation of DNA origami technology promises a future where pancreatic cancer patients might benefit from enhanced surgical outcomes and tailored chemotherapy regimens with fewer side effects. While early-stage, this research lays the groundwork for innovative therapies that exploit molecular self-assembly principles to overcome existing barriers in cancer care.

As the research community eagerly anticipates further developments, the extraordinary specificity and versatility of DNA origami nanostructures stand as a beacon for the future of precision medicine. Their capacity to interface at the molecular level with diseased cells, combined with the adaptability to carry diverse functional cargoes, positions them as a transformative tool in the battle against pancreatic and other aggressive cancers.

Subject of Research: Cells

Article Title: DNA origami-cyanine nanocomplex for precision imaging of KRAS-mutant pancreatic cancer cells

News Publication Date: 14-Feb-2025

Web References:
https://advanced.onlinelibrary.wiley.com/doi/10.1002/advs.202410278

References:
Han, B., Choi, J.H., et al. “DNA origami-cyanine nanocomplex for precision imaging of KRAS-mutant pancreatic cancer cells.” Advanced Science, DOI: 10.1002/advs.202410278.

Image Credits:
Photo by Fred Zwicky

Keywords: Pancreatic cancer, DNA origami, KRAS mutation, fluorescent imaging, nanotechnology, tumor microenvironment, 3D tumoroids, microfluidics, targeted therapy, molecular imaging, nanomedicine, tumor-stroma model

Tags: 3D-printed tumoroids for researchDNA origami in cancer treatmentextracellular matrix in tumorsfluorescence imaging agents for tumorsimaging precision in oncologyinnovative cancer diagnosis techniquesmicrofluidic models in cancer studiesnanoscale drug delivery systemspancreatic cancer research advancementsreducing toxicity in cancer therapiesstructural DNA molecules in medicinetargeted therapy for KRAS mutations

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