Tag: whole-genome sequencing

A Swedish survey found Erysipelothrix rhusiopathiae in 3.0 percent of fattening pig tonsils but 45.5 percent of wild boar tonsils.

A prospective genomic epidemiology study at a Swedish university hospital repeatedly recovered closely related multidrug-resistant Staphylococcus epidermidis lineages from hospital ...

Repeated selection at expanding swarm fronts transformed a clonal Enterobacter strain into five elongated, highly persistent lineages carrying distinctive population-level ...

Migrating cancer cells shed large vesicles called MoVes that carry whole genomic DNA, organelles and EMT-linked proteins, according to a ...

Whole-genome sequencing of 194 chicken trios from a commercial pedigree line yields the largest direct germline mutation rate estimate in ...

A clinical Glaesserella parasuis serovar 13 isolate caused dose-dependent mortality in a piglet challenge model, and whole-genome sequencing revealed putative ...

A prospective observational study in a Swedish intensive care unit found no genomically confirmed cross-contamination of ESBL-producing Enterobacterales when carriers ...

Whole-genome sequencing of 333 Campylobacter jejuni isolates shows that episodic surges of fluoroquinolone resistance in Finnish broilers came from regionally ...

A genomic study of temporal cortex tissue identifies hundreds of exon-skipping events that separate Alzheimer's disease from progressive supranuclear palsy, ...

A study analyzing 699 M. tuberculosis isolates from 2018 and 2023 in Ecuador found only one Beijing sublineage isolate, which ...

Whole-genome sequencing of 53 linezolid-resistant Staphylococcus epidermidis cases at two Austrian hospitals revealed five distinct genomic clusters across three sequence ...

A new review maps the hidden transmission chains, resistance mechanisms and diagnostic blind spots shaping modern Clostridioides difficile infection.

A Dutch hospital study found two closely related blaVIM-2-encoding plasmids persisting for nine years in sink drains and clinical isolates ...

An international consortium built a rule-based classifier that predicts ciprofloxacin resistance in Klebsiella pneumoniae from genome data and mapped resistance ...

A study finds that the HVR2-G sequencing window reliably assigns major HRSV lineages and integrates historical genotyping data with WGS-defined ...

A surveillance study of 699 tuberculosis isolates from Ecuador found the drug-resistance-associated RDRio genotype at 5.72 percent prevalence, stable from ...

A national genomic survey of 1,281 Mycobacterium tuberculosis isolates reveals four major lineages, high isoniazid and rifampicin resistance, and the ...

Researchers report the first documented case of the bacterium Pectobacterium brasiliense causing soft rot in summer squash in Mississippi, confirmed ...

Whole-genome sequencing traced livestock-associated MRSA ST398 from German pig farms through slaughter into fermented ready-to-eat sausage, where it survived the ...

An exploratory whole-genome sequencing study of four cagA-positive H. pylori gastric biopsies describes shared gene annotations involving COL3A1, ICAM1, and ...