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		<title>ERMA brings standardization to single-cell epicPCR analysis of microbial communities</title>
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		<pubDate>Fri, 09 Oct 2026 18:20:39 +0000</pubDate>
				<category><![CDATA[Biology]]></category>
		<category><![CDATA[16S rDNA]]></category>
		<category><![CDATA[Antimicrobial Resistance]]></category>
		<category><![CDATA[bioinformatics pipeline]]></category>
		<category><![CDATA[epicPCR]]></category>
		<category><![CDATA[ERMA]]></category>
		<category><![CDATA[Illumina sequencing]]></category>
		<category><![CDATA[Microbial ecology]]></category>
		<category><![CDATA[Oxford Nanopore]]></category>
		<category><![CDATA[Reproducibility]]></category>
		<category><![CDATA[resistome]]></category>
		<category><![CDATA[Snakemake]]></category>
		<category><![CDATA[wastewater surveillance]]></category>
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					<description><![CDATA[An open-source Snakemake pipeline called ERMA standardizes and automates epicPCR data analysis, achieving strong concordance with published results and full recovery of a mock community spiked into clinical wastewater.]]></description>
		
		
		
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